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Glyoxylate reductase

Glyoxylate reductase is a engineering topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Glyoxylate reductase rather than just read about it. In short: Glyoxylate reductase (EC 1.1.1.26), first isolated from spinach leaves, is an enzyme that catalyzes the reduction of glyoxylate to glycolate, using the cofactor NADH or NADPH. The systematic name of this enzyme class is glycolate:NAD+ oxidoreductase.

Glyoxylate reductase — main illustration
Glyoxylate reductase — illustration

Key takeaways

  • Glyoxylate reductase belongs to engineering; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Glyoxylate reductase to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Glyoxylate reductase from memory before moving on to harder problems.

Reference excerpt

Glyoxylate reductase (EC 1.1.1.26), first isolated from spinach leaves, is an enzyme that catalyzes the reduction of glyoxylate to glycolate, using the cofactor NADH or NADPH.

The systematic name of this enzyme class is glycolate:NAD+ oxidoreductase. Other names in common use include NADH-glyoxylate reductase, glyoxylic acid reductase, and NADH-dependent glyoxylate reductase.

Structure The crystal structure of the glyoxylate reductase enzyme from the hyperthermophilic archeon Pyrococcus horiskoshii OT3 has been reported. The enzyme exists in the dimeric form. Each monomer has two domains: a substrate-binding domain where glyoxylate binds, and a nucleotide-binding domain where the NAD(P)H cofactor binds.

Mechanism

The enzyme catalyzes the transfer of a hydride from NAD(P)H to glyoxylate, causing a reduction of the substrate to glycolate and an oxidation of the cofactor to NAD(P)+. Figure 2 shows the mechanism for this reaction. It is thought that the two residues Glu270 and His288 are important for the enzyme's catalytic function, while the residue Arg241 is thought to be important for substrate specificity.

Function The glyoxylate reductase enzyme localizes to the cell cytoplasm in plants. It can use both NADPH and NADH as a cofactor, but prefers NADPH. The enzyme substrate, glyoxylate, is a metabolite in plant photorespiration, and is produced in the peroxisome. Glyoxylate is important in the plant cell as it can deactivate RUBISCO and inhibit its activation. Hence, glyoxylate levels are important in regulating photosynthesis. The enzyme is thought of as a glyoxylate-glycolate shuttle that helps in the disposal of excess reducing equivalents from photosynthesis. This is supported by the following findings: (1) glycolate biosynthesis in the chloroplasts is highest at low CO2 concentrations, (2) the enzyme is quite specific for the NADPH cofactor which is a final product of electron transfer in the chloroplasts during photosynthesis, and (3) when isolated chloroplasts are exposed to light, they absorb glyoxylate and reduce it, but they do not absorb glycolate. Due to the link between glyoxylate levels and photosynthesis, an increase in glyoxylate levels indicates that the plant is under stress. As glyoxylate levels continue to increase, they can harm the plant by (1) reacting with DNA, (2) oxidizing membrane lipids, (3) modifying proteins, and (4) increasing the transcription of stress-related genes in the plant. This highlights the importance of glyoxylate reductase, as it helps keep plant cells healthy and detoxifies the cell by reducing glyoxylate levels. In the absence of the enzyme, the side-effects of increased glyoxylate activity can cause cellular and developmental problems in the plant. Glyoxylate reductase can be used as a tool for studying photorespiratory carbon metabolism in plant leaves. Such studies can be carried out using acetohydroxamate and aminooxyacetate, which have been found to inhibit glyoxylate reductase activity. These inhibitors are not fully specific, but provide fully reversible inhibition of the enzyme and so provide a flexible tool for metabolic studies in plants.

Disease relevance A human protein, GRHPR, has been identified that exhibits both glyoxylate and hydroxypyruvate reductase activities. The DNA sequence of this protein is up to 30% similar to the sequence of hydroxypyruvate and glyoxylate reductases found in a range of plant and microbial species. GRHPR is an important protein in the human body, as it converts the metabolic byproduct glyoxylate into the less reactive glycolate. The reduced function of the enzyme causes a build-up of glyoxylate in the liver, and in turn causes an increase in oxalate levels in urine. The reduced enzyme function can be caused by a rare inherited autosomal recessive disorder known as primary hyperoxaluria type II (PH2). This condition can cause nephrolithiasis (kidney stone), nephrocalcinosis and renal failure.

Industrial relevance Glyoxylate reductase uses NAD(P)H to reduce an oxoacid (glyoxylate) to its corresponding α-hydroxy acid (glycolate). This class of reactions provides an opportunity for the synthesis of chiral hydroxy acids. Such products are of interest in the synthesis of pharmaceuticals, such as anti-obesity compounds and semisynthetic penicillins.

Evolution Glyoxylate is an important component of the glyoxylate cycle, a variant of the citric acid cycle, whereby acetyl-CoA is converted to succinate and then other carbohydrates in plants, bacteria, protists, and fungi. Studies have been conducted to trace the genes for the glyoxylate cycle enzymes to animals. The studies have shown that these genes are in fact present in animals, but the redistribution of the genes suggest that either that (1) these genes encode other enzymes that take part in the glyoxylate cycle, but are not orthologous to the known enzymes in the cycle, or (2) animals have developed a new function for these enzymes that have yet to be characterized.

References

Illustrations

Glyoxylate reductase illustration
Glyoxylate reductase illustration
Glyoxylate reductase illustration
Glyoxylate reductase: Figure 2: The mechanism for the conversion of Glyoxylate and NAD(P)H to Glycolate and NAD(P)+
Figure 2: The mechanism for the conversion of Glyoxylate and NAD(P)H to Glycolate and NAD(P)+

Worked examples

Example 1 — a first encounter with Glyoxylate reductase

Start with the simplest possible case. Write down what Glyoxylate reductase claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In engineering, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Glyoxylate reductase before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Glyoxylate reductase ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Glyoxylate reductase

In research
Glyoxylate reductase appears in engineering research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Glyoxylate reductase in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Glyoxylate reductase is common in secondary-school and first-year university syllabi. It links to neighbouring topics EC 1.1.1, Enzymes of known structure, NADH-dependent enzymes, so understanding it makes those chapters shorter.
In everyday life
Look for Glyoxylate reductase outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.
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How to study Glyoxylate reductase in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Glyoxylate reductase means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Glyoxylate reductase out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Glyoxylate reductase in simple terms?

Glyoxylate reductase (EC 1.1.1.26), first isolated from spinach leaves, is an enzyme that catalyzes the reduction of glyoxylate to glycolate, using the cofactor NADH or NADPH. The systematic name of this enzyme class is glycolate:NAD+ oxidoreductase.

Why does Glyoxylate reductase matter?

Because it connects several engineering ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Glyoxylate reductase?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Glyoxylate reductase.

Tags

  • EC 1.1.1
  • Enzymes of known structure
  • NADH-dependent enzymes
  • NADPH-dependent enzymes

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