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HLA A1-B8 haplotype

HLA A1-B8 haplotype is a biology topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand HLA A1-B8 haplotype rather than just read about it. In short: HLA A1-B8 (Also:HL A1,8; HL A1,A8; HLA A1-Cw7-B8; HLA A*01-B*08, HLA A*0101-B*0801, HLA A*0101-Cw*0701-B*0801; HLA A*01:01-C*07:01-B*08:01) is a multigene haplotype that covers the MHC Class I region of the human major histocompatibility complex on chromosome 6. A multigene haplotype is set of inherited alleles covering several genes, or gene-alleles; common multigene haplotypes are generally the result of identity…

HLA A1-B8 haplotype — main illustration
HLA A1-B8 haplotype — illustration

Key takeaways

  • HLA A1-B8 haplotype belongs to biology; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect HLA A1-B8 haplotype to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of HLA A1-B8 haplotype from memory before moving on to harder problems.

Reference excerpt

HLA A1-B8 (Also:HL A1,8; HL A1,A8; HLA A1-Cw7-B8; HLA A*01-B*08, HLA A*0101-B*0801, HLA A*0101-Cw*0701-B*0801; HLA A*01:01-C*07:01-B*08:01) is a multigene haplotype that covers the MHC Class I region of the human major histocompatibility complex on chromosome 6. A multigene haplotype is set of inherited alleles covering several genes, or gene-alleles; common multigene haplotypes are generally the result of identity by descent from a common ancestor (share a recent common ancestor for that segment of the chromosome). Chromosomal recombination fragments multigene haplotypes as the distance to that ancestor increases in number of generations. The haplotype can be written in an extended form covering the major histocompatibility loci as follows:

HLA A*01:01 : Cw*07:01 : B*08:01 However, there are many other gene-alleles within the haplotype. In Europe A1-B8 is found, generally as part of the HLA A1-B8-DR3-DQ2 haplotype. This haplotype is 4.7 million nucleotides in length and the second longest haplotype identified within the human genome. In Africa A1-B8 and India A1-B8 is associated with other genes and other variants of A*01 and B*08

Disease associations Philosophically, A1-B8 is more than just two gene-alleles. These gene-alleles are markers for a haplotype, a stretch of chromosome 6 that contains many gene alleles. In its natural history this haplotype underwent some atypical selection, at the end of the period of evolution it became the predominant haplotypes in North/Western European ancestors. Today however the collection of genes is associated with increased incidences of certain diseases. Despite the fact that the associations have been known almost as long as A1 and "A8" were known, the role of factors affecting disease are still not clear.

A1-B8 and autoimmune diseases A1-B8 serotype was associated with a number of diseases as "HL-A"' antigens were first being described. Among these were coeliac disease, autoimmune active chronic hepatitis, myasthenia gravis, Adrenocortical hyperfunction-Cushing's syndrome, primary biliary cirrhosis. However, as study sizes increased and D serotypes were described in more detail, the association of these loci moved from the MHC class I loci to the MHC class II loci. Underlying this move was the HLA A1-B8-DR3-DQ2 haplotype, a haplotype that is in acute linkage disequilibrium in the European population. This disequilibrium made it appear that A1 and other class I gene-alleles were disease factors, when these alleles were only attached to a long segment of conserved DNA that had disease associated genes on the other end. In at least 2 diseases, the risk of autoimmune disease extends beyond the class II region of the haplotype.

Systemic lupus erythematosus The "HL-A1,8 phenotype" was found to be associated with severe systemic lupus erythematosus (SLE) (renal and central nervous system involvement) in patients of European genetic ancestry. Two-point haplotype analysis between TNFB(B*01 allele) and HLA show that the allele is in linkage disequilibrium with HLA-A1, Cw7, B8, C4A(Null), DR3, DQ2.5.

Type 1 diabetes While type 1 diabetes shows an extended association on the HLA A1-B8-DR3-DQ2 haplotype, the association appears not to extend beyond the HLA-B locus. A recent study of DR3-DQ2/DR4-DQ8 phenotype found that A1-cw7-B8 was actually lower than expected relative to other A-B types, indicating that risk associated genes are located between B8 and DR3. A*0101 appears to alter risk for type 1 diabetes but not Cw7-B8. The type 1 diabetes example shows the inherent difficulty in the use of linkage analysis alone to cipher risk.

A1-B8 and allergic disease In allergic disease A1,B8 were found to associate with allergic reactions in new-borns. A1, B8 was found increased in children with bronchial asthma and low IgA. However, some of this reaction can be attributed to the linkage of the HLA A1-B8-DR3-DQ2 haplotype to the IgA-less phenotype. A firmer association was found with atopies. A1,B8 where found more frequently in hay fever complicated by asthma or atopia relative to just hay fever. Further asthmatic patients with negative skin tests tended toward higher A1,B8 serotypes.

A1-B8 and infectious disease

HIV In the mid-1980s the association with A1-B8-DR3 and HIV progression appeared shortly after the discover of the virus. A1-B8 associated with more rapid progression to seropositivity, and was strongly associated with a rapid decline in T4 cells and development of HIV-related symptoms within four years of infection. The strongest associations were seen with A1-Cw7-B8 haplotype. C4 (complement 4) produces a null allele at on locus C4AQ. This locus in part of the HLA A1-B8-DR3-DQ2 haplotype (markers are A1, CW7, B8, BfS, C4AQ0, C4B1, DR3, DQ2) therefore one study concluded that C4AQ0 could explain the increased infectivity to HIV. The haplotype was further linked to false-tumor splenomegaly, CD8 lymphocytosis, and high IgG.

Viral hepatitis An association was seen between viral hepatitis and HLA-A1. Though, the association of A1 with autoimmune hepatitis with no anti-viral antibody was stronger than with chronic active hepatitis with anti-viral titer. The association with viral hepatitis was subsequently demonstrated and patients with antinuclear antibodies were more likely to have A1-B8-DR3. Currently studies point to association proximal the Cw*0702-B*0801 loci.

Frequencies

References

Illustrations

HLA A1-B8 haplotype: Lymphotoxin alpha is encoded with HLA A-B region
Lymphotoxin alpha is encoded with HLA A-B region
HLA A1-B8 haplotype: IgA-less or absent phenotype is associated with a number of inflammatory diseases
IgA-less or absent phenotype is associated with a number of inflammatory diseases
HLA A1-B8 haplotype: Complement 4A gene is deleted within A1-B8
Complement 4A gene is deleted within A1-B8

Worked examples

Example 1 — a first encounter with HLA A1-B8 haplotype

Start with the simplest possible case. Write down what HLA A1-B8 haplotype claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In biology, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to HLA A1-B8 haplotype before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about HLA A1-B8 haplotype ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of HLA A1-B8 haplotype

In research
HLA A1-B8 haplotype appears in biology research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses HLA A1-B8 haplotype in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
HLA A1-B8 haplotype is common in secondary-school and first-year university syllabi. It links to neighbouring topics Human MHC haplogroups, Human MHC mediated diseases, so understanding it makes those chapters shorter.
In everyday life
Look for HLA A1-B8 haplotype outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.
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How to study HLA A1-B8 haplotype in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what HLA A1-B8 haplotype means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain HLA A1-B8 haplotype out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is HLA A1-B8 haplotype in simple terms?

HLA A1-B8 (Also:HL A1,8; HL A1,A8; HLA A1-Cw7-B8; HLA A*01-B*08, HLA A*0101-B*0801, HLA A*0101-Cw*0701-B*0801; HLA A*01:01-C*07:01-B*08:01) is a multigene haplotype that covers the MHC Class I region of the human major histocompatibility complex on chromosome 6. A multigene haplotype is set of inhe…

Why does HLA A1-B8 haplotype matter?

Because it connects several biology ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study HLA A1-B8 haplotype?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on HLA A1-B8 haplotype.

Tags

  • Human MHC haplogroups
  • Human MHC mediated diseases

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