ArticleslgStudy

engineering

Imidazoleglycerol-phosphate dehydratase

Imidazoleglycerol-phosphate dehydratase is a engineering topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Imidazoleglycerol-phosphate dehydratase rather than just read about it. In short: The enzyme imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) catalyzes the chemical reaction D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate ⇌ {\displaystyle \rightleftharpoons } 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O This enzyme belongs to the family of lyases, specifically the hydro-lyases, which cleave carbon-oxygen bonds. The systematic name of this enzyme class is D-erythro-1-(imidazol-4-yl)glycerol…

Imidazoleglycerol-phosphate dehydratase — main illustration
Imidazoleglycerol-phosphate dehydratase — illustration

Key takeaways

  • Imidazoleglycerol-phosphate dehydratase belongs to engineering; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Imidazoleglycerol-phosphate dehydratase to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Imidazoleglycerol-phosphate dehydratase from memory before moving on to harder problems.

Reference excerpt

The enzyme imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) catalyzes the chemical reaction

D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate ⇌ {\displaystyle \rightleftharpoons } 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O This enzyme belongs to the family of lyases, specifically the hydro-lyases, which cleave carbon-oxygen bonds. The systematic name of this enzyme class is D-erythro-1-(imidazol-4-yl)glycerol-3-phosphate hydro-lyase [3-(imidazol-4-yl)-2-oxopropyl-phosphate-forming]. Other names in common use include IGP dehydratase, and D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate hydro-lyase. This enzyme participates in histidine metabolism as it is involved in the 6th step of histidine biosynthesis as part of a nine step cyclical pathway. There are two isoforms of IGPD; IGPD1 and IGPD2. The different isoforms are highly conserved with only 8 amino acids differing between them. These subtle differences however affect their activity but as yet it is unknown how. In most organisms IGPD is a monofunctional protein of about 22 to 29 kD. In some bacteria such as Escherichia coli, it is the C-terminal domain of a bifunctional protein that include a histidinol-phosphatase domain. In E. coli, this is the protein encoded by the hisB gene.

Inhibition Certain compounds that inhibit IGPD have been used as herbicides as animals do not have this protein. One of these inhibitors is 3-Amino-1,2,4-triazole (3-AT), which has also been used as a competitive inhibitor of the product of the yeast HIS3 gene (another IGPD), e.g. in the yeast two-hybrid system.

Structural studies As of late 2007, 3 structures have been solved for this class of enzymes, with PDB accession codes PDB: 1RHY​, PDB: 2AE8​, and PDB: 2F1D​.

References

Further reading AMES BN (1957). "The biosynthesis of histidine; D-erythro-imidazoleglycerol phosphate dehydrase". J. Biol. Chem. 228 (1): 131–43. doi:10.1016/S0021-9258(18)70696-0. PMID 13475302.

Illustrations

Imidazoleglycerol-phosphate dehydratase illustration
Imidazoleglycerol-phosphate dehydratase illustration

Worked examples

Example 1 — a first encounter with Imidazoleglycerol-phosphate dehydratase

Start with the simplest possible case. Write down what Imidazoleglycerol-phosphate dehydratase claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In engineering, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Imidazoleglycerol-phosphate dehydratase before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Imidazoleglycerol-phosphate dehydratase ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Imidazoleglycerol-phosphate dehydratase

In research
Imidazoleglycerol-phosphate dehydratase appears in engineering research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Imidazoleglycerol-phosphate dehydratase in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Imidazoleglycerol-phosphate dehydratase is common in secondary-school and first-year university syllabi. It links to neighbouring topics EC 4.2.1, EC 4.2 stubs, Enzymes of known structure, so understanding it makes those chapters shorter.
In everyday life
Look for Imidazoleglycerol-phosphate dehydratase outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.
Ask Teacher Smith questions about this articleOpens your AI tutor with a question about “Imidazoleglycerol-phosphate dehydratase” →

Affiliate

Preply — study more efficiently by working with a personal tutor. 50% off.

How to study Imidazoleglycerol-phosphate dehydratase in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Imidazoleglycerol-phosphate dehydratase means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Imidazoleglycerol-phosphate dehydratase out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Imidazoleglycerol-phosphate dehydratase in simple terms?

The enzyme imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) catalyzes the chemical reaction D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate ⇌ {\displaystyle \rightleftharpoons } 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O This enzyme belongs to the family of lyases, specifically the hydro-ly…

Why does Imidazoleglycerol-phosphate dehydratase matter?

Because it connects several engineering ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Imidazoleglycerol-phosphate dehydratase?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Imidazoleglycerol-phosphate dehydratase.

Tags

  • EC 4.2.1
  • EC 4.2 stubs
  • Enzymes of known structure

Keep exploring