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Laboratory automation

Laboratory automation is a engineering topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Laboratory automation rather than just read about it. In short: Laboratory automation is a multi-disciplinary strategy to research, develop, optimize and capitalize on technologies in the laboratory that enable new and improved processes. Laboratory automation professionals are academic, commercial and government researchers, scientists and engineers who conduct research and develop new technologies to increase productivity, elevate experimental data quality, reduce lab process…

Laboratory automation — main illustration
Laboratory automation — illustration

Key takeaways

  • Laboratory automation belongs to engineering; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Laboratory automation to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Laboratory automation from memory before moving on to harder problems.

Reference excerpt

Laboratory automation is a multi-disciplinary strategy to research, develop, optimize and capitalize on technologies in the laboratory that enable new and improved processes. Laboratory automation professionals are academic, commercial and government researchers, scientists and engineers who conduct research and develop new technologies to increase productivity, elevate experimental data quality, reduce lab process cycle times, or enable experimentation that otherwise would be impossible. The most widely known application of laboratory automation technology is laboratory robotics. More generally, the field of laboratory automation comprises many different automated laboratory instruments, devices (the most common being autosamplers), software algorithms, and methodologies used to enable, expedite and increase the efficiency and effectiveness of scientific research in laboratories.

The application of technology in today's laboratories is required to achieve timely progress and remain competitive. Laboratories devoted to activities such as high-throughput screening, combinatorial chemistry, automated clinical and analytical testing, diagnostics, large-scale biorepositories, and many others, would not exist without advancements in laboratory automation. Some universities offer entire programs that focus on lab technologies. For example, Indiana University-Purdue University at Indianapolis offers a graduate program devoted to Laboratory Informatics. Also, the Keck Graduate Institute in California offers a graduate degree with an emphasis on development of assays, instrumentation and data analysis tools required for clinical diagnostics, high-throughput screening, genotyping, microarray technologies, proteomics, imaging and other applications.

History At least since 1875 there have been reports of automated devices for scientific investigation. These first devices were mostly built by scientists themselves in order to solve problems in the laboratory. After the second world war, companies started to provide automated equipment with greater and greater complexity. Automation steadily spread in laboratories through the 20th century, but then a revolution took place: in the early 1980s, the first fully automated laboratory was opened by Dr. Masahide Sasaki. In 1993, Dr. Rod Markin at the University of Nebraska Medical Center created one of the world's first clinical automated laboratory management systems. In the mid-1990s, he chaired a standards group called the Clinical Testing Automation Standards Steering Committee (CTASSC) of the American Association for Clinical Chemistry, which later evolved into an area committee of the Clinical and Laboratory Standards Institute. In 2004, the National Institutes of Health (NIH) and more than 300 nationally recognized leaders in academia, industry, government, and the public completed the NIH Roadmap to accelerate medical discovery to improve health. The NIH Roadmap clearly identifies technology development as a mission critical factor in the Molecular Libraries and Imaging Implementation Group (see the first theme – New Pathways to Discovery – at https://web.archive.org/web/20100611171315/http://nihroadmap.nih.gov/). Despite the success of Dr. Sasaki laboratory and others of the kind, the multi-million dollar cost of such laboratories has prevented adoption by smaller groups. This is all more difficult because devices made by different manufactures often cannot communicate with each other. However, recent advances based on the use of scripting languages like Autoit have made possible the integration of equipment from different manufacturers. Using this approach, many low-cost electronic devices, including open-source devices, become compatible with common laboratory instruments. Some startups such as Emerald Cloud Lab and Strateos provide on-demand and remote laboratory access on a commercial scale. A 2017 study indicates that these commercial-scale, fully integrated automated laboratories can improve reproducibility and transparency in basic biomedical experiments, and that over nine in ten biomedical papers use methods currently available through these groups.

Low-cost laboratory automation A large obstacle to the implementation of automation in laboratories has been its high cost. Many laboratory instruments are very expensive. This is justifiable in many cases, as such equipment can perform very specific tasks employing cutting-edge technology. However, there are devices employed in the laboratory that are not highly technological but still are very expensive. This is the case of many automated devices, which perform tasks that could easily be done by simple and low-cost devices like simple robotic arms, universal (open-source) electronic modules, Lego Mindstorms, or 3D printers. So far, using such low-cost devices together with laboratory equipment was considered to be very difficult. However, it has been demonstrated that such low-cost devices can substitute without problems the standard machines used in laboratory. It can be anticipated that more laboratories will take advantage of this new reality as low-cost automation is very attractive for laboratories. A technology that enables the integration of any machine regardless of their brand is scripting, more specifically, scripting involving the control of mouse clicks and keyboard entries, like AutoIt. By timing clicks and keyboard inputs, different software interfaces controlling different devices can be perfectly synchronized.

References

Further reading Katz, Alan (1 May 2009), "Lab Automation Protocols and Virtual Workcells", Genetic Engineering & Biotechnology News, OMICS, vol. 29, no. 9, Mary Ann Liebert, pp. 40–41, ISSN 1935-472X, OCLC 77706455, archived from the original on 25 February 2012, retrieved 25 July 2009

Illustrations

Laboratory automation illustration
Laboratory automation: Automated laboratory equipment
Automated laboratory equipment
Laboratory automation: An autosampler for liquid or gaseous samples based on a microsyringe
An autosampler for liquid or gaseous samples based on a microsyringe

Worked examples

Example 1 — a first encounter with Laboratory automation

Start with the simplest possible case. Write down what Laboratory automation claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In engineering, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Laboratory automation before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Laboratory automation ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Laboratory automation

In research
Laboratory automation appears in engineering research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Laboratory automation in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Laboratory automation is common in secondary-school and first-year university syllabi. It links to neighbouring topics Laboratory automation, Laboratory equipment, Laboratory techniques, so understanding it makes those chapters shorter.
In everyday life
Look for Laboratory automation outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.

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How to study Laboratory automation in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Laboratory automation means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Laboratory automation out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Laboratory automation in simple terms?

Laboratory automation is a multi-disciplinary strategy to research, develop, optimize and capitalize on technologies in the laboratory that enable new and improved processes. Laboratory automation professionals are academic, commercial and government researchers, scientists and engineers who conduc…

Why does Laboratory automation matter?

Because it connects several engineering ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Laboratory automation?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Laboratory automation.

Tags

  • Laboratory automation
  • Laboratory equipment
  • Laboratory techniques
  • Robotics
  • Robotics engineering

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