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Latrunculin

Latrunculin is a chemistry topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Latrunculin rather than just read about it. In short: The latrunculins are a family of natural products and toxins produced by certain sponges, including genus Latrunculia and Negombata, whence the name is derived. It binds actin monomers near the nucleotide binding cleft with 1:1 stoichiometry and prevents them from polymerizing.

Latrunculin — main illustration
Latrunculin — illustration

Key takeaways

  • Latrunculin belongs to chemistry; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Latrunculin to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Latrunculin from memory before moving on to harder problems.

Reference excerpt

The latrunculins are a family of natural products and toxins produced by certain sponges, including genus Latrunculia and Negombata, whence the name is derived. It binds actin monomers near the nucleotide binding cleft with 1:1 stoichiometry and prevents them from polymerizing. Administered in vivo, this effect results in disruption of the actin filaments of the cytoskeleton, and allows visualization of the corresponding changes made to the cellular processes. This property is similar to that of cytochalasin, but has a narrow effective concentration range. Latrunculin has been used to great effect in the discovery of cadherin distribution regulation and has potential medical applications. Latrunculin A, a type of the toxin, was found to be able to make reversible morphological changes to mammalian cells by disrupting the actin network. Latrunculin A:

Target and functions Gelsolin - Latrunculin A causes end- blocking; this protein binds to the barbed sides of the actin filaments which accelerates nucleation. This calcium-regulated protein also plays a role in assembly and disassembly of cilia which plays a crucial role in handedness. Latrunculin B:

Target and Function Actin- Latrunculin B makes up the structure of the actin fibers. Protein spire homolog 2- needed for cell division, vesicle transport within the actin filament and is essential for the formation of the cleavage formation during cell division[4].

History Latrunculin is a toxin that is produced by sponges. The red-coloured Latrunculia Magnifica Keller is an abundant sponge in the Gulf of Aqaba and the Gulf of Suez in the red sea, where it lives at a depth of 6–30 meters. The toxin was discovered around 1970. Researchers observed that the red-coloured sponges, Latrunculia Magnifica Keller, were never damaged or eaten by fishes, while others were. Furthermore, when researchers squeezed the sponges in the sea, they observed that a red fluid came out. Fishes nearby immediately fled the surrounding area when the sponge secreted the fluid. These were the first indications that these sponges produced a toxin. Later this hypothesis was confirmed by squeezing the sponge in an aquarium with fish, whereupon the fish showed a loss of balance and severe bleeding, dying within only 4–6 minutes. Similar effects were observed when the toxin was injected in mice. Latrunculin makes up to 0.35% of the dry weight of the sponge. There are two main forms of the toxin, A and B. Latrunculin A is only present in sponges which live in the Gulf of Suez while latrunculin B only exist in sponges in the Gulf of Aqaba. Why this is the case is still under investigation.

Structure

There are several isomers of latrunculin, A, B, C, D, G, H, M, S and T. The most common structures are latrunculin A and B. Their formulas are respectively C22H31NO5S and C20H29NO5S. The macrolactone ring on top that contains double bonds is a structural feature of the latrunculin molecules. The side chain contains an acylthiazolidinone substitute. Besides these natural occurring forms, scientist have made synthetic forms with different toxic strengths. Figure 2 shows some of these forms with their relative ability to disrupt microfilament activity. Semisynthetic forms that contained N-alkylated derivates were inactive.

Mechanism of action Latrunculin A and latrunculin B affect polymerization of actin. Latrunculin binds actin monomers near the nucleotide binding cleft with 1:1 stoichiometry and prevents them from polymerizing. The nucleotide monomers are prevented from dissociation from the nucleotide binding cleft, thus preventing polymerizing. Experimental evidence shows that latruculin-A is biologically active in the solvent DMSO, but not in aqueous solutions, as demonstrated in cell culture and in brain tissue probably due to cellular permeation. When actin is impaired due to latrunculin, Shiga toxins have a better chance of infiltrating the intestinal epithelial monolayer in E. coli, which may cause a higher chance of generating gastrointestinal illnesses. It seems that actin monomers are more sensitive to bind latrunculin A than to bind Latrunculin B. In other words, latrunculin A is a more potent toxin. Latrunculin B is inactivated faster than latrunculin A. The prevention of polymerizing of the actin filaments causes reversible changes in the morphology of mammalian cells. Latranculin interferes with the structure of the cytoskeleton in rats. After latrunculin B exposure, mouse fibroblasts grow bigger and PtK2 kidney cells from a potoroo stem produced long, branched extensions. The extensions seem to be an accumulation of actin monomers.

Metabolism Yeast cells in absence of the proteins osh3 or osh5 demonstrated hypersensitivity to latrunculin B. The osh proteins are homologous to OSBP generated enzymes that appear in mammals, indicating that these might play a role in the toxicokinetics of latrunculins. Yeast mutants that are resistant to latrunculin show a mutation, D157E, that initiates a hydrogen bond with latrunculin. Other yeast mutants adjust the binding site, thus making it resistant to latrunculin. No research has been done to figure out how the biotransformation of latrunculin works in eukaryotic cells. However, research suggests that it is the unaltered form of latrunculin that causes toxic effects.

Toxicity As latrunculin inhibits actin polymerization and actomyosin contractile ability, exposure to latrunculin may result in cellular relaxation, expansion of drainage tissues and decreased outflow resistance in e.g. the trabecular meshwork.

Plant Latrunculin B causes marked and dose-dependent reductions in pollen germination frequency and pollen tube growth rate. Adding latrunculin B to solutions of pollen F-actin resulted in a rapid decrease in the total amount of polymer, with the extent of depolymerization increasing with the concentration of the toxin. The concentration of latrunculin B required for half-maximal inhibition of pollen germination is 40 to 50 nM. In contrast, pollen tube extension is much more sensitive, requiring only 5 to 7 nM LATB for half-maximal inhibition. The disruption of germination and pollen tube growth by latrunculin B is partially reversible at low concentrations. (<30 nM).

… excerpt ends here. Continue reading the full article.

Illustrations

Latrunculin illustration
Latrunculin: Figure 2 relative activity of Latrunculin analogues
The micro filament disrupting activity (at 10 μM effective concentration). Abbreviations: ± weak effect, + significant effect, ++ strong effect, +++ very strong effect (less than 20% viable cells).
Figure 2 relative activity of Latrunculin analogues The micro filament disrupting activity (at 10 μM effective concentration). Abbreviations: ± weak effect, + significant effect, ++ strong effect, +++ very strong effect (less than 20% viable cells).

Worked examples

Example 1 — a first encounter with Latrunculin

Start with the simplest possible case. Write down what Latrunculin claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In chemistry, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Latrunculin before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Latrunculin ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Latrunculin

In research
Latrunculin appears in chemistry research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Latrunculin in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Latrunculin is common in secondary-school and first-year university syllabi. It links to neighbouring topics Actin inhibitors, Heterocyclic compounds with 2 rings, Lactones, so understanding it makes those chapters shorter.
In everyday life
Look for Latrunculin outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.
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How to study Latrunculin in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Latrunculin means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Latrunculin out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Latrunculin in simple terms?

The latrunculins are a family of natural products and toxins produced by certain sponges, including genus Latrunculia and Negombata, whence the name is derived. It binds actin monomers near the nucleotide binding cleft with 1:1 stoichiometry and prevents them from polymerizing.

Why does Latrunculin matter?

Because it connects several chemistry ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Latrunculin?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Latrunculin.

Tags

  • Actin inhibitors
  • Heterocyclic compounds with 2 rings
  • Lactones
  • Oxygen heterocycles
  • Thiazolidines

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