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Light-gated ion channel

Light-gated ion channel is a science topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Light-gated ion channel rather than just read about it. In short: Light-gated ion channels are a family of ion channels regulated by electromagnetic radiation. Other gating mechanisms for ion channels include voltage-gated ion channels, ligand-gated ion channels, mechanosensitive ion channels, and temperature-gated ion channels.

Light-gated ion channel — main illustration
Light-gated ion channel — illustration

Key takeaways

  • Light-gated ion channel belongs to science; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Light-gated ion channel to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Light-gated ion channel from memory before moving on to harder problems.

Reference excerpt

Light-gated ion channels are a family of ion channels regulated by electromagnetic radiation. Other gating mechanisms for ion channels include voltage-gated ion channels, ligand-gated ion channels, mechanosensitive ion channels, and temperature-gated ion channels. Most light-gated ion channels have been synthesized in the laboratory for study, although two naturally occurring examples, channelrhodopsin and anion-conducting channelrhodopsin, are currently known. Photoreceptor proteins, which act in a similar manner to light-gated ion channels, are generally classified instead as G protein-coupled receptors.

Mechanism Light-gated ion channels function in a similar manner to other gated ion channels. Such transmembrane proteins form pores through lipid bilayers to facilitate the passage of ions. These ions move from one side of the membrane to another under the influence of an electrochemical gradient. When exposed to a stimulus, a conformational change occurs in the transmembrane region of the protein to open or close the ion channel. In the specific case of light-gated ion channels, the transmembrane proteins are usually coupled with a smaller molecule that acts as a photoswitch, whereby photons bind to the switching molecule, to then alter the conformation of the proteins, so that the pore changes from a closed state to an open state, or vice versa, thereby increasing or decreasing ion conductance. Retinal is a good example of a molecular photoswitch and is found in the naturally occurring channelrhodopsins.

Synthetic isoforms Once channelrhosopsin had been identified and characterized, the channel's ion selectivity was modified in order to control membrane potential through optogenetic control. Directed mutations of the channel changed the charges lining the pore, resulting in a pore which instead excluded cations in favor of anions. Other types of gated ion channels, ligand-gated and voltage-gated, have been synthesized with a light-gated component in an attempt to better understand their nature and properties. By the addition of a light-gated section, the kinetics and mechanisms of operation can be studied in depth. For example, the addition of a light-gated component allows for the introduction of many highly similar ligands to be introduced to the binding site of a ligand-gated ion channel to assist in the determination of the mechanism. Such ion channels have been modified by binding a photoswitch to confer photosensitivity on the ion channel. This is done through careful selection of a tether which can lengthen or shorten through photoisomerization. One side of the tether is bound to the ion channel protein and the other end of the tether is bound to a blocking group, which has a high binding affinity for an exposed portion of the pore. When the tether is lengthened, it allows the blocking section to bind to the pore and prevent ionic current. When the tether is shortened, it disrupts this obstruction and opens the pore. Kinetic studies have demonstrated that fine temporal and spatial control can be achieved in this manner.

Azobenzene is a common choice for the functional portion of a tether for synthetically-developed light-gated ion channels because of its well documented length change as either cis or trans isomers, as well as the excitation wavelength needed to induce photoisomerization. Azobenzene converts to its longer trans-isomer at a wavelength of λ=500 nm and to its cis-isomer at λ=380 nm. In 1980, the first ion channel to be adapted for study with a light-gated mechanism was the nicotinic acetylcholine receptor. This receptor was well-known at the time, and so was aptly suited to adaptation, and allowed for a study of the kinetics as not allowed before. The expression of light-gated ion channels in a specific cell type through promoter control allows for the regulation of cell potential by either depolarizing the membrane to 0 mV for cation-permeant channelrhodopsin or by holding the voltage at –67 mV for anion-conducting channelrhodopsin. Depolarization can conduct a current in the range of 5 fA per channel and occurs on the timescale of action potentials and neurotransmitter exocytosis. They have an advantage over other types of ion channel regulation in that they provide non-invasive, reversible membrane potential changes with fine temporal and spatial control granted by induction through laser stimuli. They reliably stimulate single action potentials with rapid depolarization and can be utilized in vivo because they do not require high intensity illumination to maintain function, unlike other techniques like light-activated proton pumps and photoactivatable probes.

Examples Examples of light-gated ion channels occur in both natural and synthetic environments. These include:

Naturally occurring Channelrhodopsins were the first discovered family of light-gated ion channels. Channelrhodopsin-1 (from Chlamydomonas reinhardtii and Volvox) Channelrhodopsin-2 Anion-conducting channelrhodopsin

Synthetically adapted Nicotinic acetylcholine receptor was the first ion channel to be synthetically adapted with a light-gated mechanism. Light-activated potassium channels have been engineered from bacterial K+ channels with the goal of inhibiting neuronal activity upon illumination. A second strategy is to combine a cyclic nucleotide gated K+ channel with a photoactivated adenylyl cyclase to inhibit neuronal activity at very low light levels. Many other fully synthetic, light-gated channels have been produced as well.

References

Worked examples

Example 1 — a first encounter with Light-gated ion channel

Start with the simplest possible case. Write down what Light-gated ion channel claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In science, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Light-gated ion channel before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Light-gated ion channel ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Light-gated ion channel

In research
Light-gated ion channel appears in science research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Light-gated ion channel in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Light-gated ion channel is common in secondary-school and first-year university syllabi. It links to neighbouring topics Ion channels, so understanding it makes those chapters shorter.
In everyday life
Look for Light-gated ion channel outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.
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How to study Light-gated ion channel in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Light-gated ion channel means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Light-gated ion channel out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Light-gated ion channel in simple terms?

Light-gated ion channels are a family of ion channels regulated by electromagnetic radiation. Other gating mechanisms for ion channels include voltage-gated ion channels, ligand-gated ion channels, mechanosensitive ion channels, and temperature-gated ion channels.

Why does Light-gated ion channel matter?

Because it connects several science ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Light-gated ion channel?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Light-gated ion channel.

Tags

  • Ion channels

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