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Melanopsin

Melanopsin is a biology topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Melanopsin rather than just read about it. In short: Melanopsin is a type of photopigment belonging to a larger family of light-sensitive retinal proteins called opsins and encoded in humans by the gene OPN4. In the mammalian retina, there are two additional categories of opsins, both involved in the formation of visual images: rhodopsin and photopsin (types I, II, and III) in the rod and cone photoreceptor cells, respectively.

Melanopsin — main illustration
Melanopsin — illustration

Key takeaways

  • Melanopsin belongs to biology; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Melanopsin to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Melanopsin from memory before moving on to harder problems.

Reference excerpt

Melanopsin is a type of photopigment belonging to a larger family of light-sensitive retinal proteins called opsins and encoded in humans by the gene OPN4. In the mammalian retina, there are two additional categories of opsins, both involved in the formation of visual images: rhodopsin and photopsin (types I, II, and III) in the rod and cone photoreceptor cells, respectively. In humans, melanopsin is found in intrinsically photosensitive retinal ganglion cells (ipRGCs). It is also found in the iris of mice and primates. Melanopsin is also found in rats, amphioxus, and other chordates. ipRGCs are photoreceptor cells which are particularly sensitive to the absorption of short-wavelength (blue) visible light and communicate information directly to the area of the brain called the suprachiasmatic nucleus (SCN), also known as the central "body clock", in mammals. Melanopsin plays an important non-image-forming role in the setting of circadian rhythms as well as other functions. Mutations in the Opn4 gene can lead to clinical disorders, such as Seasonal Affective Disorder (SAD). According to one study, melanopsin has been found in eighteen sites in the human brain (outside the retinohypothalamic tract), intracellularly, in a granular pattern, in the cerebral cortex, the cerebellar cortex and several phylogenetically old regions, primarily in neuronal soma, not in nuclei. Melanopsin is also expressed in human cones. However, only 0.11% to 0.55% of human cones express melanopsin and are exclusively found in the peripheral regions of the retina. The human peripheral retina senses light at high intensities that is best explained by four different photopigment classes.

Discovery

Melanopsin was discovered by Ignacio Provencio as a new opsin in the melanophores, or light-sensitive skin cells, of the African clawed frog in 1998. A year later, researchers found that mice without any rods or cones, the cells involved in image-forming vision, still entrained to a light-dark cycle. This observation led to the conclusion that neither rods nor cones, located in the outer retina, are necessary for circadian entrainment and that a third class of photoreceptor exists in the mammalian eye. Provencio and colleagues then found in 2000 that melanopsin is also present in mouse retina, specifically in ganglion cells, and that it mediates non-visual photoreceptive tasks. Melanopsin is encoded by the Opn4 gene with orthologs in a variety of organisms. These retinal ganglion cells were found to be innately photosensitive, since they responded to light even while isolated, and were thus named intrinsically photosensitive Retinal Ganglion Cells (ipRGCs). They constitute a third class of photoreceptor cells in the mammalian retina, besides the already known rods and cones, and were shown to be the principal conduit for light input to circadian photoentrainment. In fact, it was later demonstrated by Satchidananda Panda and colleagues that melanopsin pigment may be involved in entrainment of a circadian oscillator to light cycles in mammals since melanopsin was necessary for blind mice to respond to light.

Species distribution Mammals have orthologous melanopsin genes named Opn4, which are approximately 50-55% conserved. However, non-mammalian vertebrates, including chickens, zebrafish, and Xenopus laevis, have two versions of the melanopsin gene: a mammalian-like Opn4m and a separate Opn4x from a lineage that diverged from Opn4m about 360 million years ago. Both versions are functional in these vertebrates. Mammals lost the gene Opn4x relatively early in their evolution, leading to a general reduction in photosensory capability. The loss is estimated to have occurred during the time in which nocturnal mammals were evolving.

Structure The human melanopsin gene, opn4, is expressed in ipRGCs, which comprises only 1-2% of RGCs in the inner mammalian retina, as studied by Samer Hattar and colleagues. The gene spans approximately 11.8 kb and is mapped to the long arm of chromosome 10. The gene includes nine introns and ten exons compared to the four to seven exons typically found in other human opsins. In non-mammalian vertebrates, melanopsin is found in a wider subset of retinal cells, as well as in photosensitive structures outside the retina, such as the iris muscle of the eye, deep brain regions, the pineal gland, and the skin. Paralogs of Opn4 include OPN1LW, OPN1MW, rhodopsin and encephalopsin. Melanopsin, like all other animal opsins (e.g. rhodopsin), is a G-protein-coupled receptor (GPCR). The melanopsin protein has an extracellular N-terminal domain, an intracellular C-terminal domain, and seven alpha helices spanning through the plasma membrane. The seventh helix has a lysine that corresponds to Lys2967.43 in cattle rhodopsin and that is conserved in almost all opsins. This lysine binds covalently retinal via a Schiff-base, which makes melanopsin light sensitive. In fact this is abolished if the lysine is replaced by an alanine. Melanopsin is more closely related to invertebrate visual opsins, which are rhabdomeric opsin, than to vertebrate visual opsins, which are cliary opsins. This is also reflected by the downstream signaling cascade, melanopsin couples in ipRGCs to the G-proteins G(q), G(11), and G(14), which are all of the G(q)-type. In fact, they can functionally replace each other, as a knocking out only two of them has no phenotypical effect. The G-proteins activate the phospholipase C PLCB4, which causes the TRP-channels TRPC6 and TRPC7 mediate to open so that the cell depolarizes. This is like in the photoreceptor cells of the Drosophila eye, and in contrast to the vertebrate rod and cone cells, where phototransduction eventually makes the cells hyperpolarize. Like other rhabdomeric opsins, Melanopsin has intrinsic photoisomerase activity.

Function

… excerpt ends here. Continue reading the full article.

Illustrations

Melanopsin illustration
Melanopsin illustration
Melanopsin illustration
Melanopsin illustration
Melanopsin: Nerve cells containing melanopsin are shown in blue in the spread out retina.
Nerve cells containing melanopsin are shown in blue in the spread out retina.

Worked examples

Example 1 — a first encounter with Melanopsin

Start with the simplest possible case. Write down what Melanopsin claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In biology, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Melanopsin before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Melanopsin ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Melanopsin

In research
Melanopsin appears in biology research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Melanopsin in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Melanopsin is common in secondary-school and first-year university syllabi. It links to neighbouring topics Circadian rhythm, G protein-coupled receptors, Genes on human chromosome 10, so understanding it makes those chapters shorter.
In everyday life
Look for Melanopsin outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.

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How to study Melanopsin in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Melanopsin means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Melanopsin out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Melanopsin in simple terms?

Melanopsin is a type of photopigment belonging to a larger family of light-sensitive retinal proteins called opsins and encoded in humans by the gene OPN4. In the mammalian retina, there are two additional categories of opsins, both involved in the formation of visual images: rhodopsin and photopsi…

Why does Melanopsin matter?

Because it connects several biology ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Melanopsin?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Melanopsin.

Tags

  • Circadian rhythm
  • G protein-coupled receptors
  • Genes on human chromosome 10
  • Human proteins

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