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Molecular autopsy

Molecular autopsy is a chemistry topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Molecular autopsy rather than just read about it. In short: Molecular autopsy or postmortem molecular testing is a set of molecular techniques used in forensic medicine to attempt to determine the cause of death in unexplained cases, in particular sudden unexplained deaths (for example sudden cardiac death). About 30% of sudden cardiac deaths in young people are not explained after full conventional autopsy, and are classified as sudden unexplained deaths.

Molecular autopsy — main illustration
Molecular autopsy — illustration

Key takeaways

  • Molecular autopsy belongs to chemistry; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Molecular autopsy to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Molecular autopsy from memory before moving on to harder problems.

Reference excerpt

Molecular autopsy or postmortem molecular testing is a set of molecular techniques used in forensic medicine to attempt to determine the cause of death in unexplained cases, in particular sudden unexplained deaths (for example sudden cardiac death). About 30% of sudden cardiac deaths in young people are not explained after full conventional autopsy, and are classified as sudden unexplained deaths. The use of a panel of genetic markers for long QT syndrome, catecholaminergic polymorphic ventricular tachycardia and cardiac channel myopathies elucidated around 40 to 45% of the cases.

Ethics In today’s day and age the use of Molecular Autopsy has come with its share of ethical issues. The issues are raised because there are no set laws that a Medical Examiner must follow. For instance it is not required for an examiner to get permission from a relative to go forth with a molecular autopsy. This has created many issues for families because they may not always want to know the results of why a loved one died. Knowing this information can create anxiety and concern for family members over a possible mutation of their own gene that could cause their death, while they would have no way of stopping it. It also creates an issue because with most if not all examinations, samples of a test are retained in a lab. This means the tests from a loved one is saved forever, to be possibly used in a different experiment. The family usually has no say on whether this will happen or not. The problem that arises for medical examiners is that if an examination is done and the lives of family members could be at risk, they have no authorization to tell the family if they do not wish to know. Some examiners believe that this is against their duty as a professional doctor. For example, it has been estimated that 30% of young sudden cardiac deaths can be traced to being inherited. So doctors feel that it is against their profession to not let someone know when they could be at risk.

Methods When a traditional medical autopsy is not able to determine the sudden cause of death, molecular autopsy may help provide an alternative insight through the use of Deoxyribonucleic acid (DNA) sequencing. It looks at things from a cellular level instead of only what the human eye can see. The first step in performing a molecular autopsy is to obtain a sample of blood or tissue from the individual after death has occurred. DNA is then extracted from the blood sample in order to undergo a process of genetic sequencing. Then, the DNA sequence is carefully analyzed to detect any gene mutations that may be a cause of sudden death. Initially, molecular autopsy focused on the direct DNA sequencing of four genes. However, recent advancements in sequencing technologies have made it possible to screen a large number of genes at once from a small sample of DNA through whole-exome sequencing (WES) in which the coding regions of all 22,000 genes are sequenced. This potentially allows the detection of genetic variants of genes related to all major diseases.

Case Studies A study of sudden death brought a mother to once question whether her thirteen-year-old son has what previously killed her seventeen-year-old son. This son had been found lying in bed dead with an autopsy that was inconclusive. Many blamed it on drug use and abuse, but that was really not the cause.

Almost half the sudden deaths of previously healthy children have no findings on autopsy. These children are referred to as having sudden unexplained death syndrome (SUDS). In the Olmsted County population study, six of the twelve cases died of unknown causes of SUDS. A lot of forensic pathologists blame a fatal arrhythmia of the heart to be the cause of SUDS due to the lethal disorders like long QT syndrome (LQTS). This is a prolonged QT interval in the heart’s natural rhythm. This can leave no trace for an autopsy. The clinical signs of LQTS are syncope, seizures, or sudden death. In England there are around 200 SUDS cases yearly, and nearly a third of those were blamed on LQTS. This however, cannot be proved without an electrocardiogram before death. By looking at the molecular level of the issues that cause SUDS and/or LQTS, they may be able to find the ion channels that are cardiac defective. There are six LQTS genetic markers, five LQTS genes, and around 200 mutations identified all in patients with LQTS. By targeting these molecules, molecular autopsy can be possible. This is how molecular autopsy is relevant in all three of the following cases.

Case 1 In this case of the mother with questions of her living son possible having the same issue that her now dead son had, there was a history of these LQTS clinical signs that were stated above in the family. Specifically, the grandmother had syncopal episodes multiple times. Although, multiple electrocardiograms showed no significant findings that would lead to a diagnosis of LQTS. There were multiple studies done, one in particular was the epinephrine-triggered alterations in repolarization. This showed the results of having five nucleotides (guanine [g], cytosine [c], guanine, cytosine, and thymidine [t]) from positions 735 - 739 were not present. These are the genetic components of DNA. This resulted in the cardiac potassium channel to cause a shift of amino acids. This shift is where the stop codon at an amino acid is introduced and needed. This can severely impact the depolarization and repolarization of the heart, which is crucial for the normal rhythm of the muscle.

Case 2 Another study was done for molecular autopsy on the RyR2-encoded cardiac ryanodine receptor in SUDS. There were 49 cases in this study, 30 of which were male. Thirteen of the 49 studied had a family history of syncope. In seven of these cases of SUDS, there were six distinct RyR2 missense mutations. During these deaths, the activities were as follows: three cases of exertion, one case of emotion, and three unknown cases. This study was of the first on RyR2 in molecular autopsy. It targeted 18 of the 105 protein-encoding exons of the cardiac ryanodine receptor/calcium release channel. This revealed one in every seven to be positive for the RyR2 mutations in SUDS. This studied showed that testing of this mutation should be a part of the autopsy investigation. This study also proved that this mutation is possibly inheritable.

… excerpt ends here. Continue reading the full article.

Illustrations

Molecular autopsy: DNA structure
DNA structure
Molecular autopsy: PQRST complex of a heart beat
PQRST complex of a heart beat

Worked examples

Example 1 — a first encounter with Molecular autopsy

Start with the simplest possible case. Write down what Molecular autopsy claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In chemistry, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Molecular autopsy before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Molecular autopsy ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Molecular autopsy

In research
Molecular autopsy appears in chemistry research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Molecular autopsy in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Molecular autopsy is common in secondary-school and first-year university syllabi. It links to neighbouring topics Forensic techniques, so understanding it makes those chapters shorter.
In everyday life
Look for Molecular autopsy outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.
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How to study Molecular autopsy in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Molecular autopsy means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Molecular autopsy out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Molecular autopsy in simple terms?

Molecular autopsy or postmortem molecular testing is a set of molecular techniques used in forensic medicine to attempt to determine the cause of death in unexplained cases, in particular sudden unexplained deaths (for example sudden cardiac death). About 30% of sudden cardiac deaths in young peopl…

Why does Molecular autopsy matter?

Because it connects several chemistry ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Molecular autopsy?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Molecular autopsy.

Tags

  • Forensic techniques

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