biology

National Microbial Pathogen Data Resource

National Microbial Pathogen Data Resource is a biology topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand National Microbial Pathogen Data Resource rather than just read about it. In short: The National Microbial Pathogen Data Resource was one of the eight Bioinformatics Resource Centers funded by the National Institutes of Allergy and Infectious Diseases, NIAID a component of the National Institutes of Health (NIH), which is an agency of the United States Department of Health and Human Services. The NMPDR was funded for five years from 2004 through a grant to co-PI's Rick Stevens from the Computation…

Key takeaways

National Microbial Pathogen Data Resource belongs to biology; place it in that map before memorising details.
Learn the definition first, then one example that makes the definition concrete.
Connect National Microbial Pathogen Data Resource to a quantity you can measure, compute or draw — that is where exam questions come from.
Reproduce the core statement of National Microbial Pathogen Data Resource from memory before moving on to harder problems.

Reference excerpt

The National Microbial Pathogen Data Resource was one of the eight Bioinformatics Resource Centers funded by the National Institutes of Allergy and Infectious Diseases, NIAID a component of the National Institutes of Health (NIH), which is an agency of the United States Department of Health and Human Services. The NMPDR was funded for five years from 2004 through a grant to co-PI's Rick Stevens from the Computation Institute at the University of Chicago, and Ross Overbeek at the Fellowship for the Interpretation of Genomes. The NMPDR was initially tasked with annotating and curating the genomes of five pathogenic species of Bacteria, (Campylobacter, Listeria, Staphylococcus, Streptococcus, and Vibrio). However, after four years, the team were asked to also oversee the curation and annotation of the genomes of seven additional bacterial species (Chlamydia, Chlamydophila, Haemophilus, Mycoplasma, Neisseria, Treponema, and Ureaplasma). The flagship website, the National Microbial Pathogen Data Resource provides curated annotations in an environment for comparative analysis of genomes and biological subsystems. In addition, the NMPDR team have also developed the Rapid Annotation using Subsystems Technology Server (RAST) for annotating and curating complete microbial genomes and the Metagenomics RAST for annotating metagenomes.

Note to NMPDR Users As of January 2010, the bacterial organism originally covered by NMPDR under the BRC program have been transferred to PATRIC the Pathosystems Resource Integration Center.

Worked examples

Example 1 — a first encounter with National Microbial Pathogen Data Resource

Start with the simplest possible case. Write down what National Microbial Pathogen Data Resource claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In biology, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to National Microbial Pathogen Data Resource before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about National Microbial Pathogen Data Resource ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of National Microbial Pathogen Data Resource

In research: National Microbial Pathogen Data Resource appears in biology research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry: Engineering practice reuses National Microbial Pathogen Data Resource in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom: National Microbial Pathogen Data Resource is common in secondary-school and first-year university syllabi. It links to neighbouring topics Biology organizations, so understanding it makes those chapters shorter.
In everyday life: Look for National Microbial Pathogen Data Resource outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.

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How to study National Microbial Pathogen Data Resource in 20 minutes

Read the reference excerpt below once, without taking notes.
Close the page and write down what National Microbial Pathogen Data Resource means in your own words.
Compare your version with the excerpt and mark what you missed.
Work through the three examples above with pen and paper.
Explain National Microbial Pathogen Data Resource out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is National Microbial Pathogen Data Resource in simple terms?

Why does National Microbial Pathogen Data Resource matter?

Because it connects several biology ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study National Microbial Pathogen Data Resource?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on National Microbial Pathogen Data Resource.