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Okadaic acid

Okadaic acid is a chemistry topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Okadaic acid rather than just read about it. In short: Okadaic acid, C44H68O13, is a toxin produced by several species of dinoflagellates. It is known to accumulate in both marine sponges and shellfish.

Okadaic acid — main illustration
Okadaic acid — illustration

Key takeaways

  • Okadaic acid belongs to chemistry; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Okadaic acid to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Okadaic acid from memory before moving on to harder problems.

Reference excerpt

Okadaic acid, C44H68O13, is a toxin produced by several species of dinoflagellates. It is known to accumulate in both marine sponges and shellfish. One of the primary causes of diarrhetic shellfish poisoning, okadaic acid is a potent inhibitor of specific protein phosphatases, and has a variety of negative effects on cells. A polyketide, polyether derivative of a C38 fatty acid, okadaic acid and other members of its family have illuminated many biological processes both with respect to dinoflagellate polyketide synthesis as well as the role of protein phosphatases in cell growth.

History As early as 1961, reports of gastrointestinal disorders following the consumption of cooked mussels appeared in both the Netherlands and Los Lagos. Attempts were made to determine the source of the symptoms; however, they failed to elucidate the true culprit, instead implicating a species of microplanctonic dinoflagellates. In the summers of the late 1970s, a series of food poisoning outbreaks in Japan led to the discovery of a new type of shellfish poisoning. Named for the most prominent symptoms, the new Diarrhetic Shellfish Poisoning (DSP) only affected the northern portion of Honshu during 1976; however, by 1977 large cities such as Tokyo and Yokohama were affected. Research into the shellfish consumed in the affected regions showed that a fat-soluble toxin was responsible for the 164 documented cases, and this toxin was traced to mussels and scallops harvested in the Miyagi prefecture. In northeastern Japan, a legend had existed that during the season of paulownia flowers, shellfish can be poisonous. Studies following this outbreak showed that toxicity of these mussels and scallops appeared and increased during the months of June and July, and all but disappeared between August and October. Elsewhere in Japan, in 1975 Fujisawa pharmaceutical company observed that the extract of a black sponge, Halichondria okadai, was a potent cytotoxin; this was dubbed Halichondrine-A. In 1981, the structure of one such toxin, okadaic acid, was determined after it was extracted from both the black sponge in Japan, Halichondria okadai, for which it was named, and a sponge in the Florida Keys, Halichondria melanodocia. Okadaic acid sparked research both for its cytotoxicicity, and for being the first reported marine ionophore. Several years later, one of the toxins responsible for DSP, dinophysistoxin-1 (DTX-1) (named for one of the organisms implicated in its production, Dinophysis fortii) was compared to and shown to be very chemically similar to okadaic acid; okadaic acid itself was implicated in DSP around the same time. Since its initial discovery, reports of DSP have spread throughout the world, and are especially concentrated in Japan, South America and Europe.

Synthesis

Derivatives Okadaic acid (OA) and its derivatives, the dinophysistoxins (DTX), are members of a group of molecules called polyketides. The complex structure of these molecules include multiple spiroketals, along with fused ether rings.

Biosynthesis Being polyketides, the okadaic acid family of molecules are synthesized by dinoflagellates via polyketide synthase (PKS). However, unlike the majority of polyketides, the dinoflagellate group of polyketides undergo a variety of unusual modifications. Okadaic acid and its derivatives are some of the most well studied of these polyketides, and research on these molecules via isotopic labeling has helped to elucidate some of those modifications. Okadaic acid is formed from a starter unit of glycolate, found at carbons 37 and 38, and all subsequent carbons in the chain are derived from acetate. Because polyketide synthesis is similar to fatty acid synthesis, during chain extension the molecule may undergo reduction of the ketone, dehydration, and reduction of the olefin. Failure to perform one of more of these three steps, combined with several unusual reactions is what allows for the formation of the functionality of okadaic acid. Carbon deletion and addition at the alpha and beta position comprise the other transformations present in the okadaic acid biosynthesis. Carbon deletion occurs by way of a Favorskii rearrangement and subsequent decarboxylation. Attack of a ketone in the growing chain by enzyme-bound acetates, and subsequent decarboxylation/dehydration results in an olefin replacing the ketone, in both alpha and beta alkylation. After this the olefin can isomerize to more thermodynamically stable positions, or can be activated for cyclizations, in order to produce the natural product.

Laboratory syntheses

Three total syntheses of okadaic acid have been achieved, along with many more formal syntheses and several total syntheses of the other dinophysistoxins. The first total synthesis of okadaic acid was completed in 1986 by Isobe et al., just five years after the molecule's structure was elucidated. The next two were completed in 1997 and 1998 by the Forsyth and Ley groups respectively. In Isobe's synthesis, the molecule was broken into three pieces, along the C14–C15 bonds, and the C27–C28 bonds. This formed fragments A, B, and C, which were all synthesized separately, after which the B and C fragments were combined, and then combined with the A fragment. This synthesis contained 106 steps, with a longest linear sequence of 54 steps. The precursors to all three fragments were all glucose derivatives obtained from the chiral pool. Spiroketals were obtained from precursor ketone diols, and were therefore formed thermally in acid.

Similar to Isobe's synthesis, the Forsyth synthesis sought to reduce the number of steps and to increase potential for designing analogues late in the synthesis. To do this, Forsyth et al. designed the synthesis to allow for structural changes and installation of important functional groups before large pieces were joined. Their resulting synthesis was 3% yielding, with 26 steps in the longest linear sequence. As above, spiroketalization was performed thermodynamically with introduction of acid.

… excerpt ends here. Continue reading the full article.

Illustrations

Okadaic acid illustration
Okadaic acid illustration
Okadaic acid: Structures of Okadaic Acid and the Dinophysistoxins
Structures of Okadaic Acid and the Dinophysistoxins
Okadaic acid: Isobe's Synthesis of Okadaic Acid.
Isobe's Synthesis of Okadaic Acid.
Okadaic acid: Forsyth's Synthesis of Okadaic Acid.
Forsyth's Synthesis of Okadaic Acid.

Worked examples

Example 1 — a first encounter with Okadaic acid

Start with the simplest possible case. Write down what Okadaic acid claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In chemistry, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Okadaic acid before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Okadaic acid ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Okadaic acid

In research
Okadaic acid appears in chemistry research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Okadaic acid in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Okadaic acid is common in secondary-school and first-year university syllabi. It links to neighbouring topics Carboxylic acids, Laxatives, Oxygen heterocycles, so understanding it makes those chapters shorter.
In everyday life
Look for Okadaic acid outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.
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How to study Okadaic acid in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Okadaic acid means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Okadaic acid out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Okadaic acid in simple terms?

Okadaic acid, C44H68O13, is a toxin produced by several species of dinoflagellates. It is known to accumulate in both marine sponges and shellfish.

Why does Okadaic acid matter?

Because it connects several chemistry ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Okadaic acid?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Okadaic acid.

Tags

  • Carboxylic acids
  • Laxatives
  • Oxygen heterocycles
  • Phosphatase inhibitors
  • Phycotoxins
  • Polyether toxins
  • Polyketides
  • Spiroketals

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