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Oplophorus-luciferin 2-monooxygenase

Oplophorus-luciferin 2-monooxygenase is a engineering topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Oplophorus-luciferin 2-monooxygenase rather than just read about it. In short: Oplophorus-luciferin 2-monooxygenase (EC 1.13.12.13), also known as Oplophorus luciferase (referred in this article as OpLuc) is a luciferase, an enzyme, from the deep-sea shrimp Oplophorus gracilirostris, belonging to a group of coelenterazine luciferases. Unlike other luciferases, it has a broader substrate specificity and can also bind to bisdeoxycoelenterazine efficiently.

Oplophorus-luciferin 2-monooxygenase — main illustration
Oplophorus-luciferin 2-monooxygenase — illustration

Key takeaways

  • Oplophorus-luciferin 2-monooxygenase belongs to engineering; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Oplophorus-luciferin 2-monooxygenase to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Oplophorus-luciferin 2-monooxygenase from memory before moving on to harder problems.

Reference excerpt

Oplophorus-luciferin 2-monooxygenase (EC 1.13.12.13), also known as Oplophorus luciferase (referred in this article as OpLuc) is a luciferase, an enzyme, from the deep-sea shrimp Oplophorus gracilirostris, belonging to a group of coelenterazine luciferases. Unlike other luciferases, it has a broader substrate specificity and can also bind to bisdeoxycoelenterazine efficiently. It was the third example of a luciferase (Other than Aequorea and Renilla) to be purified in lab. The systematic name of this enzyme class is Oplophorus-luciferin:oxygen 2-oxidoreductase (decarboxylating). This enzyme is also called Oplophorus luciferase.

Chemical reaction The two substrates of this enzyme are the luciferin, coelenterazine and oxygen. Its products are the oxyluciferin, coelenteramide, carbon dioxide, and a photon. It belongs to the family of oxidoreductases, specifically those acting on single donors with O2 as oxidant and initial incorporation of two atoms of oxygen into the substrate. Although the enzyme is part of the group of enzymes that act on coelenterazine, such as Renilla and Gaussia luciferases, it does not share base pair sequences with these enzymes. OpLuc catalyzes the ATP independent chemical reaction:

The result of this process is loss of CO2 and emission of a photon of blue light at ~460 nm. This reaction has an optimal pH of 9, optimal salt concentration of 0.05-0.1 M, and optimal temperature of ~40 C (making it an unusually heat resistant luciferase), although because O.gracilirostris are deep sea animals living in below 20 C temperatures, luciferase is normally expressed and folded at low temperatures.

Biological function

When stimulated in Oplophorus gracilirostris, OpLuc is secreted from the base of legs and antennae of the deep-sea shrimp as a defense mechanism. This mechanism causes O.gracilirostris release a luminous, bright blue luciferase cloud. There are many species of shrimp which display similar bioluminescence.

Structure OpLuc is a complex of two covalently bonded protein subunits: two molecules of 19 kDa and two molecules of 35 kDa components, making it a heterotetrameric molecule. The proteins signal the enzyme for secretion in luminescence, catalyzed by the protein 19 kDa. The luciferase has many cysteine residues that stabilize the enzyme in extracellular environments using disulfide bonds.

19 kDa Protein This catalytic component of OpLuc has 196 amino acids with one cysteine in the carboxyl terminus and is distinct from proteins found in other luciferases. The protein is made up of two domains with repetitive sequencing of Ia-c and Ila-d in the peptide chain. It is thought to be the protein to cause the bioluminescent reaction of O.gracilirostris, but functions ineffectively without its larger, subunit counterpart. Although the crystal structure of OpLec has yet to be completely analyzed and mapped, 19 kDa experimentally expressed in mammalian cells (regarded as KAZ). The protein was isolated and mutated to catalyze a bright and sustained luminescent reaction to create an engineered luciferase, NanoLuc (NLuc), and a coelenterazine analogue (furimazine) to be used as a cellular reporter.

35 kDa Protein The lesser known component of the OpLuc enzyme has 320 amino acids with 11 cysteine and 5 leucine molecules. The amino terminus of the protein was experimentally concluded to begin at 39 amino acids. It is thought to stabilize 19 kDa and is not thought to be affect by substrate specificity, however its exact function is not known.

References

Illustrations

Oplophorus-luciferin 2-monooxygenase illustration
Oplophorus-luciferin 2-monooxygenase: Oplophorus gracilirostris
Oplophorus gracilirostris

Worked examples

Example 1 — a first encounter with Oplophorus-luciferin 2-monooxygenase

Start with the simplest possible case. Write down what Oplophorus-luciferin 2-monooxygenase claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In engineering, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Oplophorus-luciferin 2-monooxygenase before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Oplophorus-luciferin 2-monooxygenase ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Oplophorus-luciferin 2-monooxygenase

In research
Oplophorus-luciferin 2-monooxygenase appears in engineering research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Oplophorus-luciferin 2-monooxygenase in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Oplophorus-luciferin 2-monooxygenase is common in secondary-school and first-year university syllabi. It links to neighbouring topics EC 1.13.12, Enzymes of unknown structure, so understanding it makes those chapters shorter.
In everyday life
Look for Oplophorus-luciferin 2-monooxygenase outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.
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How to study Oplophorus-luciferin 2-monooxygenase in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Oplophorus-luciferin 2-monooxygenase means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Oplophorus-luciferin 2-monooxygenase out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Oplophorus-luciferin 2-monooxygenase in simple terms?

Oplophorus-luciferin 2-monooxygenase (EC 1.13.12.13), also known as Oplophorus luciferase (referred in this article as OpLuc) is a luciferase, an enzyme, from the deep-sea shrimp Oplophorus gracilirostris, belonging to a group of coelenterazine luciferases. Unlike other luciferases, it has a broade…

Why does Oplophorus-luciferin 2-monooxygenase matter?

Because it connects several engineering ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Oplophorus-luciferin 2-monooxygenase?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Oplophorus-luciferin 2-monooxygenase.

Tags

  • EC 1.13.12
  • Enzymes of unknown structure

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