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Persephonella marina

Persephonella marina is a science topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Persephonella marina rather than just read about it. In short: Persephonella marina is a Gram-negative, rod shaped bacteria that is a member of the Aquificota phylum. Stemming from Greek, the name Persephonella is based upon the mythological goddess Persephone.

Key takeaways

  • Persephonella marina belongs to science; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Persephonella marina to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Persephonella marina from memory before moving on to harder problems.

Reference excerpt

Persephonella marina is a Gram-negative, rod shaped bacteria that is a member of the Aquificota phylum. Stemming from Greek, the name Persephonella is based upon the mythological goddess Persephone. Marina stems from a Latin origin, meaning "belonging to the sea". It is a thermophile with an obligate chemolithoautotrophic metabolism. Growth of P. marina can occur in pairs or individually, but is rarely seen aggregating in large groups. The organism resides on sulfidic chimneys in the deep ocean and has never been documented as a pathogen.

Discovery Persephonella marina was first isolated in 1999 using MSH medium, a medium containing 29 g NaCl, 2 g NaOH, 0.5 g KCl, 1.36 g MgCl2•6H2O, 7 g MgSO4•7H2O, 2 g Na2S2O3•5H2O, 0.4 g CaCl2•2H2O, 0.2 g NH4Cl, 0.3 g K2HPO4•3H2O and 10 ml of a trace-element stock solution, with a gas phase containing twenty parts carbon dioxide, one part oxygen, and twenty six parts hydrogen gas. Initial isolation was provided by a sample obtained from a depth of 2,507 meters on a sulfidic chimney. This particular sulfidic chimney was named "Q-Vent" and is located at a latitude of 9° North and a longitude of 104° West in a region called the East Pacific Rise. The environment in which P. marina was obtained was too harsh for humans due to the excessive temperature (133 °C with spikes up to 170 °C) and extreme pressure. Due to these harsh conditions a submarine was used for extraction of the samples.

Genomics Persephonella marina has a genome size of 1.9 mega (10^9) base pairs with 2,048 encoded genes. The organism contains a GC content of 37%. This is unusually low for thermophilic organisms which typically contain high amounts of GC bonds to prevent DNA denaturation. The organism's closest phylogenetic neighbor was isolated under the same study and was named Persephonella guaymasensis. It shares 96% of its genome with P. marina. Other similar genomes include: Hydrogenothermus marinus (94.5% similarity), and Aquifex pyrophilius (85% similarity).

Characterization

Metabolism Persephonella marina is an obligate chemolithoautotroph. It utilizes three primary electron donors: elemental sulfur (S°), hydrogen gas (H2), and thiosulfate (S2O32−). Oxygen and nitrate act as electron acceptors for P. marina. In the lab, when P. marina was exposed to high amounts of elemental sulfur, the organism produced an excess of sulfide. When exposed to microaerophilic conditions as found near deep sea hydrothermal vents, P. marina was able to perform aerobic respiration. Oxygen is not the primary electron acceptor and can only be utilized when exposed to oxygen in this microaerophilic environment.

Growth conditions Persephonella marina is a thermophilic organism that grows optimally in a temperature range of 55 to 80 degrees Celsius. The organism does show the ability to survive at hyperthermophilic conditions as it was first isolated in water temperatures of 133 degrees Celsius. P. marina does not have the ability to form spores, highlighting the presence of a process that keeps DNA and essential proteins stable at extremely high temperatures commonly found near hydrothermal vents. Once cultured the organism was found to be able to grow in halophilic conditions between 2 and 4 1/2 percent NaCl but grows optimally at 2 1/2 percent NaCl. P. marina possesses a wide range of pH in which it can grow, spanning from 4.7 to 7.5. In optimal growth conditions, the doubling time for P. marina is around 5 hours.

Glucosylglycerate and α(1,6)glucosyl-α-(1,2)glucosylglycerate Persephonella marina was used as a model organism for the characterization of genes and enzymes for the synthesis of glucosylglycerate found for the first time in a thermophile. Glucosylglycerate protects the microbe from thermal stresses and helps in adaptation to starvation conditions. This is of great importance to scientists who wish to study extremophiles. This solute is also important in the advancement of biotechnology. When tested in lab, glucosylglycerate increased the melting temperature of essential enzymes in basic metabolic pathways. It has an effect on a microbe's ability to withstand high-pressure environments. This rare solute has only been found in a few other halophilic bacteria and one Archaeon, but has never been encountered in a hyperthermophile such as P. marina. It is also worth noting that P. marina has led to the discovery of α(1,6)glucosyl-α-(1,2)glucosylglycerate by proton NMR and is still currently under study. Both of these solutes are disaccharide heterosides which are extremely rare in thermophiles.

References

External links Type strain of Persephonella marina at BacDive - the Bacterial Diversity Metadatabase

Worked examples

Example 1 — a first encounter with Persephonella marina

Start with the simplest possible case. Write down what Persephonella marina claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In science, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Persephonella marina before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Persephonella marina ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Persephonella marina

In research
Persephonella marina appears in science research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Persephonella marina in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Persephonella marina is common in secondary-school and first-year university syllabi. It links to neighbouring topics Aquificota, Bacteria described in 2002, so understanding it makes those chapters shorter.
In everyday life
Look for Persephonella marina outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.
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How to study Persephonella marina in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Persephonella marina means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Persephonella marina out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Persephonella marina in simple terms?

Persephonella marina is a Gram-negative, rod shaped bacteria that is a member of the Aquificota phylum. Stemming from Greek, the name Persephonella is based upon the mythological goddess Persephone.

Why does Persephonella marina matter?

Because it connects several science ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Persephonella marina?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Persephonella marina.

Tags

  • Aquificota
  • Bacteria described in 2002

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