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Phase-contrast microscopy

Phase-contrast microscopy is a physics topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Phase-contrast microscopy rather than just read about it. In short: Phase-contrast microscopy (PCM) is an optical microscopy technique that converts phase shifts in light passing through a transparent specimen to brightness changes in the image. Phase shifts themselves are invisible, but become visible when shown as brightness variations.

Phase-contrast microscopy — main illustration
Phase-contrast microscopy — illustration

Key takeaways

  • Phase-contrast microscopy belongs to physics; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Phase-contrast microscopy to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Phase-contrast microscopy from memory before moving on to harder problems.

Reference excerpt

Phase-contrast microscopy (PCM) is an optical microscopy technique that converts phase shifts in light passing through a transparent specimen to brightness changes in the image. Phase shifts themselves are invisible, but become visible when shown as brightness variations. When light waves travel through a medium other than a vacuum, interaction with the medium causes the wave amplitude and phase to change in a manner dependent on properties of the medium. Changes in amplitude (brightness) arise from the scattering and absorption of light, which is often wavelength-dependent and may give rise to colors. Photographic equipment and the human eye are only sensitive to amplitude variations. Without special arrangements, phase changes are therefore invisible. Yet, phase changes often convey important information.

Phase-contrast microscopy is particularly important in biology. It reveals many cellular structures that are invisible with a bright-field microscope, as exemplified in the figure. These structures were made visible to earlier microscopists by staining, but this required additional preparation and death of the cells. The phase-contrast microscope made it possible for biologists to study living cells and how they proliferate through cell division. It is one of the few methods available to quantify cellular structure and components without using fluorescence. After its invention in the early 1930s, phase-contrast microscopy proved to be such an advancement in microscopy that its inventor Frits Zernike was awarded the Nobel Prize in Physics in 1953. The woman who manufactured this microscope, Caroline Bleeker, often remains uncredited.

Working principle

The basic principle to make phase changes visible in phase-contrast microscopy is to separate the illuminating (background) light from the specimen-scattered light (which makes up the foreground details) and to manipulate these differently. The ring-shaped illuminating light (depicted in green in figure) that passes the condenser annulus is focused on the specimen by the condenser. Some of the illuminating light is scattered by the specimen (yellow). The remaining light is unaffected by the specimen and forms the background light (red). When observing an unstained biological specimen, the scattered light is weak and typically phase-shifted by −90° (due to both the typical thickness of specimens and the refractive index difference between biological tissue and the surrounding medium) relative to the background light. This leads to the foreground (blue vector in accompanying figure) and background (red vector) having nearly the same intensity, resulting in low image contrast. In a phase-contrast microscope, image contrast is increased in two ways: by generating constructive interference between scattered and background light rays in regions of the field of view that contain the specimen, and by reducing the amount of background light that reaches the image plane. First, the background light is phase-shifted by −90° by passing it through a phase-shift ring, which eliminates the phase difference between the background and the scattered light rays.

When the light is then focused on the image plane (where a camera or eyepiece is placed), this phase shift causes background and scattered light rays originating from regions of the field of view that contain the sample (i.e., the foreground) to constructively interfere, resulting in an increase in the brightness of these areas compared to regions that do not contain the sample. Finally, the background is dimmed ~70-90% by a neutral density filter ring; this method maximizes the amount of scattered light generated by the illumination light, while minimizing the amount of illumination light that reaches the image plane. Some of the scattered light that illuminates the entire surface of the filter will be phase-shifted and dimmed by the rings, but to a much lesser extent than the background light, which only illuminates the phase-shift and neutral density filter rings. The above describes negative phase contrast. In its positive form, the background light is instead phase-shifted by +90°. The background light will thus be 180° out of phase relative to the scattered light. The scattered light will then be subtracted from the background light to form an image with a darker foreground and a lighter background, as shown in the first figure.

Related methods

The success of the phase-contrast microscope has led to a number of subsequent phase-imaging methods. In 1952, Georges Nomarski patented what is today known as differential interference contrast (DIC) microscopy. It enhances contrast by creating artificial shadows, as if the object is illuminated from the side. But DIC microscopy is unsuitable when the object or its container alter polarization. With the growing use of polarizing plastic containers in cell biology, DIC microscopy is increasingly replaced by Hoffman modulation contrast microscopy, invented by Robert Hoffman in 1975. Traditional phase-contrast methods enhance contrast optically, blending brightness and phase information in a single image. Since the introduction of the digital camera in the mid-1990s, several new digital phase-imaging methods have been developed, collectively known as quantitative phase-contrast microscopy. These methods digitally create two separate images, an ordinary bright-field image and a so-called phase-shift image. In each image point, the phase-shift image displays the quantified phase shift induced by the object, which is proportional to the optical thickness of the object. In this way measurement of the associated optical field can remedy the halo artifacts associated with conventional phase contrast by solving an optical inverse problem to computationally reconstruct the scattering potential of the object.

See also Live cell imaging Phase-contrast imaging Phase-contrast X-ray imaging

References

External links

Optical Microscopy Primer — Phase Contrast Microscopy by Florida State University Phase contrast and dark field microscopes (Université Paris-Sud) Microscope Parts need to know.

Illustrations

Phase-contrast microscopy illustration
Phase-contrast microscopy: The same cells imaged with traditional bright-field microscopy (left), and with phase-contrast microscopy (right)
The same cells imaged with traditional bright-field microscopy (left), and with phase-contrast microscopy (right)
Phase-contrast microscopy illustration
Phase-contrast microscopy: S. cerevisiae cells imaged by DIC microscopy
S. cerevisiae cells imaged by DIC microscopy
Phase-contrast microscopy: A quantitative phase-contrast microscopy image of cells in culture.
The height and color of an image point correspond to the optical thickness,
which only depends on the object's thickness and the relative refractive index.
The volume of an object can thus be determined when the difference in refractive index between
the object and the surrounding media is known.
A quantitative phase-contrast microscopy image of cells in culture. The height and color of an image point correspond to the optical thickness, which only depends on the object's thickness and the relative refractive index. The volume of an object can thus be determined when the difference in refractive index between the object and the surrounding media is known.

Worked examples

Example 1 — a first encounter with Phase-contrast microscopy

Start with the simplest possible case. Write down what Phase-contrast microscopy claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In physics, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Phase-contrast microscopy before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Phase-contrast microscopy ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Phase-contrast microscopy

In research
Phase-contrast microscopy appears in physics research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Phase-contrast microscopy in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Phase-contrast microscopy is common in secondary-school and first-year university syllabi. It links to neighbouring topics Cell imaging, Dutch inventions, Microscopes, so understanding it makes those chapters shorter.
In everyday life
Look for Phase-contrast microscopy outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.
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How to study Phase-contrast microscopy in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Phase-contrast microscopy means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Phase-contrast microscopy out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Phase-contrast microscopy in simple terms?

Phase-contrast microscopy (PCM) is an optical microscopy technique that converts phase shifts in light passing through a transparent specimen to brightness changes in the image. Phase shifts themselves are invisible, but become visible when shown as brightness variations.

Why does Phase-contrast microscopy matter?

Because it connects several physics ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Phase-contrast microscopy?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Phase-contrast microscopy.

Tags

  • Cell imaging
  • Dutch inventions
  • Microscopes
  • Optical microscopy techniques

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