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Spindle pole body

Spindle pole body is a science topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Spindle pole body rather than just read about it. In short: The spindle pole body (SPB) is the microtubule organizing center in yeast cells, functionally equivalent to the centrosome. Unlike the centrosome the SPB does not contain centrioles.

Key takeaways

  • Spindle pole body belongs to science; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Spindle pole body to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Spindle pole body from memory before moving on to harder problems.

Reference excerpt

The spindle pole body (SPB) is the microtubule organizing center in yeast cells, functionally equivalent to the centrosome. Unlike the centrosome the SPB does not contain centrioles. The SPB organises the microtubule cytoskeleton which plays many roles in the cell. It is important for organising the spindle and thus in cell division.

SPB structure in Saccharomyces cerevisiae The molecular mass of a diploid SPB, including microtubules and microtubule associated proteins, is estimated to be 1–1.5 GDa whereas a core SPB is 0.3–0.5 GDa. The SPB is a cylindrical multilayer organelle. These layers are: an outer plaque (OP), which connects to the cytoplasmic microtubules (cMT); a first intermediate layer (IL1) and an electrondense second intermediate layer (IL2); an electrondense central plaque (CP), which is at the level of the nuclear envelope and is connected to it by hook-like structures, an ill-defined inner plaque (IP); and a layer of the inner plaque that contains capped nuclear microtubules (nMT) ends. The central plaque and IL2 appeared as distinct but highly ordered layers. The other layers (MT ends, IP, IL1, and OP) do not show ordered packing. The location of the inner and outer plaques in relation to the nuclear membranes is maintained during the entire cell cycle. One side of the central plaque is associated with an electron-dense region of the nuclear envelope termed the half bridge. The SPB has constant height size (the inner plaque to outer plaque distance) for about 150 nm, but its diameter changes during cell cycle, e.g. in haploid cells, the SPB grows in diameter from 80 nm in G1 to 110 nm in mitosis. The SPB diameter depends on DNA content. A larger SPB diameter increases microtubule nucleation capacity of the SPB, which is important for chromosome segregation. All SPB proteins can be divided into three groups: core components, half-bridge components and components needed for connection with NE. There is no known motif or structure, that makes a protein belong to SPB, but analysis of known SPB proteins and their genes shows several common features. The core contains mostly proteins with coiled-coil motifs, that allow to form dimers, either with themselves or with others proteins and maintain regular structures (e.g. CP, IL2). Many SPB genes contain MluI cell cycle boxes in their promoter elements that lead to G1 specific gene transcription. The primary sequence of SPB components should contain consensus phosphorylation sites for mitotic kinases, because the SPB is highly phosphorylated. The main central plaque component is coiled-coil protein Spc42p (for spindle pole body component) also found to be a part of satellite, that forms a core crystal of SPB. The Spc42p protein is involved in initiation of SPB assembly and its duplication. The Spc42p associates with Spc110p and Spc29p, two other essential coiled-coil proteins that localize to the nuclear face of the SPB. Spc110 localizes to the central plaque and is thought to bind to Spc29p and calmodulin (Cmd1p). The role of Spc110p is a spacer molecule between the central and inner plaque and γ-tubilin complex binding protein. The essential function of calmodulin is at the SPB where it has been proposed to regulate binding of Spc110p to Spc29p. Spc29 forms in the central plaque a repeating structure. Spc98p and Spc97p are two similar yeast γ –tubulin (Tub4p) binding proteins required for microtubule nucleation. Spc98p, Spc97p and Tub4p are found at the inner and outer plaques of SPB and are involved in microtubules organization. Spc42 faces the cytoplasm and binds to coiled-coil Cnm67p (chaotic nuclear migration). Cnm67p forms dimers and functions as a spacer between IL2 and IL1. Cnm67 binds to the outer plaque protein Nud1p, a SPB protein required for exit from mitosis. Another coiled-coil protein, Spc72p, is also found in the outer plaque. Spc72p associates with Nud1p and to components of the γ-tubulin complex. The half-bridge is the site of new SPB assembly, and it also plays a role in cytoplasmic microtubule nucleation during G1 and karyogamy. Both sides of the half-bridge are not equivalent. Two single-pass membrane proteins, Kar1p and Mps3p, localize to the half-bridge and are required to form and/or maintain the structure. Both proteins bind to Cdc31p, the yeast centrin homolog, which also localizes to the half-bridge and is required for half-bridge integrity. An additional half-bridge component, Sfi1p, shows ability to bind to Cdc31p through multiple conserved Cdc31-binding sites throughout its length. Kar1p is also involved in connecting the half-bridge to the core SPB via its interaction with Bbp1p. In addition, Kar1p plays a role in reorganization of the SPB during G1.

SPB duplication pathway in Saccharomyces cerevisiae Duplication of the SPB once, and only once, during each cell cycle is essential for formation of a bipolar mitotic spindle and accurate chromosome segregation. SPB duplication in S. cerevisiae can be divided into several steps. The first step occurs early in G1, when satellite material forms on cytoplasmic tip of half-bridge. During the second step half-bridge elongates and completes its nuclear and cytoplasmic faces fusion. In the same time satellite forms duplication plaque, a layered structure that is similar to the cytoplasmic half of a mature SPB. The last step of SPB duplication is insertion of the duplication plaque into the nuclear envelope and assembly of nuclear SPB components. At the end of G1 yeast cells contain two duplicated side-by-side SPBs connected by a complete bridge. Then bridge separates and SPB nucleates bipolar spindle. SPB continues to grow until mitosis, so protein components are able to incorporate into both SPBs throughout the cell cycle.

References

External links Jaspersen, Sue L.; Winey, Mark (2004). "THE BUDDING YEAST SPINDLE POLE BODY: Structure, Duplication, and Function". Annual Review of Cell and Developmental Biology. 20: 1–28. doi:10.1146/annurev.cellbio.20.022003.114106. PMID 15473833. Helfant, Astrid (2002). "Composition of the spindle pole body of Saccharomyces cerevisiae and the proteins involved in its duplication". Current Genetics. 40 (5): 291–310. doi:10.1007/s00294-001-0263-x. PMID 11935220.

Worked examples

Example 1 — a first encounter with Spindle pole body

Start with the simplest possible case. Write down what Spindle pole body claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In science, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Spindle pole body before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Spindle pole body ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Spindle pole body

In research
Spindle pole body appears in science research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Spindle pole body in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Spindle pole body is common in secondary-school and first-year university syllabi. It links to neighbouring topics Cytoskeleton, Organelles, so understanding it makes those chapters shorter.
In everyday life
Look for Spindle pole body outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.

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How to study Spindle pole body in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Spindle pole body means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Spindle pole body out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Spindle pole body in simple terms?

The spindle pole body (SPB) is the microtubule organizing center in yeast cells, functionally equivalent to the centrosome. Unlike the centrosome the SPB does not contain centrioles.

Why does Spindle pole body matter?

Because it connects several science ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Spindle pole body?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Spindle pole body.

Tags

  • Cytoskeleton
  • Organelles

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