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Stearoyl-CoA 9-desaturase

Stearoyl-CoA 9-desaturase is a engineering topic covered in the lgStudy science library. This page brings together a partial reference excerpt, illustrations, worked examples, real-world applications and a short study plan, so you can understand Stearoyl-CoA 9-desaturase rather than just read about it. In short: Stearoyl-CoA desaturase (Δ-9-desaturase or SCD-1) is an endoplasmic reticulum enzyme that catalyzes the rate-limiting step in the formation of monounsaturated fatty acids (MUFAs), specifically oleate and palmitoleate from stearoyl-CoA and palmitoyl-CoA. Oleate and palmitoleate are major components of membrane phospholipids, cholesterol esters and alkyl-diacylglycerol.

Stearoyl-CoA 9-desaturase — main illustration
Stearoyl-CoA 9-desaturase — illustration

Key takeaways

  • Stearoyl-CoA 9-desaturase belongs to engineering; place it in that map before memorising details.
  • Learn the definition first, then one example that makes the definition concrete.
  • Connect Stearoyl-CoA 9-desaturase to a quantity you can measure, compute or draw — that is where exam questions come from.
  • Reproduce the core statement of Stearoyl-CoA 9-desaturase from memory before moving on to harder problems.

Reference excerpt

Stearoyl-CoA desaturase (Δ-9-desaturase or SCD-1) is an endoplasmic reticulum enzyme that catalyzes the rate-limiting step in the formation of monounsaturated fatty acids (MUFAs), specifically oleate and palmitoleate from stearoyl-CoA and palmitoyl-CoA. Oleate and palmitoleate are major components of membrane phospholipids, cholesterol esters and alkyl-diacylglycerol. In humans, the enzyme is present in two isoforms, encoded respectively by the SCD1 and SCD5 genes. Stearoyl-CoA desaturase is a key enzyme in fatty acid metabolism. It is responsible for forming a double bond in stearoyl-CoA. This is how the monounsaturated fatty acid oleic acid is produced from the saturated fatty acid, stearic acid. A series of redox reactions, during which two electrons flow from NADH to flavoprotein cytochrome b5, then to the electron acceptor cytochrome b5 as well as molecular oxygen introduces a single double bond within a row of methylene fatty acyl-CoA substrates. The complexed enzyme adds a single double bond between the C9 and C10 of long-chain acyl-CoAs from de-novo synthesis. This enzyme belongs to the family of oxidoreductases, specifically those acting on paired donors, with O2 as oxidant and incorporation or reduction of oxygen. The oxygen incorporated need not be derived from O2 with oxidation of a pair of donors resulting in the reduction of O to two molecules of water. The systematic name of this enzyme class is stearoyl-CoA,ferrocytochrome-b5:oxygen oxidoreductase (9,10-dehydrogenating). This enzyme participates in polyunsaturated fatty acid biosynthesis and PPAR signaling pathway. It employs one cofactor, iron. It is found in animals and fungi.

Function

Stearoyl-CoA desaturase (SCD; EC 1.14.19.1) is an iron-containing enzyme that catalyzes a rate-limiting step in the synthesis of unsaturated fatty acids. The principal product of SCD is oleic acid, which is formed by desaturation of stearic acid. It catalyzes the chemical reaction

stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ ⇌ {\displaystyle \rightleftharpoons } oleoyl-CoA + 2 ferricytochrome b5 + 2 H2O The 4 substrates of this enzyme are stearoyl-CoA, ferrocytochrome b5, O2, and H+, whereas its 3 products are oleoyl-CoA, ferricytochrome b5, and H2O. Promiscuous reactions include:

Efficient conversion of vaccenyl-CoA into rumenyl-CoA in humans and rats.

Biochemical role The ratio of stearic acid to oleic acid has been implicated in the regulation of cell growth and differentiation through effects on cell membrane fluidity and signal transduction.

In mammals Four SCD paralogs, Scd1 through Scd4, have been identified in mouse. In contrast, only 2 SCD paralogs, SCD1 and SCD5 (MIM 608370, Uniprot Q86SK9), have been identified in human. SCD1 shares about 85% amino acid identity with all 4 mouse SCD isoforms, as well as with rat Scd1 and Scd2. In contrast, SCD5 (also known as hSCD2) shares limited homology with the rodent SCDs and appears to be unique to primates. SCD-1 is an important metabolic control point. Inhibition of its expression may enhance the treatment of a host of metabolic diseases. One of the unanswered questions is that SCD remains a highly regulated enzyme, even though oleate is readily available, as it is an abundant monounsaturated fatty acid in dietary fat.

Structure

The enzyme's structure is key to its function. SCD-1 consists of four transmembrane domains. Both the amino and carboxyl terminus and eight catalytically important histidine regions, which collectively bind iron within the catalytic center of the enzyme, lie in the cytosol region. The five cysteines in SCD-1 are located within the lumen of the endoplasmic reticulum. The yeast version (OLE1) exists as a dimer in vivo. The two human versions exist as dimers and oligomers in vitro. The substrate binding site is long, thin and hydrophobic and kinks the substrate tail at the location where the di-iron catalytic centre introduces the double bond. The literature suggests that the enzyme accomplishes the desaturation reaction by removing the first hydrogen at C9 position and then the second hydrogen from the C-10 position. Because the C-9 and C-10 are positioned close to the iron-containing center of the enzyme, this mechanism is hypothesized to be specific for the position at which the double bond is formed.

… excerpt ends here. Continue reading the full article.

Illustrations

Stearoyl-CoA 9-desaturase: The SCD reaction requires molecular oxygen, NAD(P)-cytochrome b5 reductase, cytochrome b5 to conduct an electron flow from NADPH to the terminal electron acceptor molecular oxygen, releasing water.
The SCD reaction requires molecular oxygen, NAD(P)-cytochrome b5 reductase, cytochrome b5 to conduct an electron flow from NADPH to the terminal electron acceptor molecular oxygen, releasing water.
Stearoyl-CoA 9-desaturase: Stearoyl–CoA (black) held in a kinked conformation by SCD1's binding pocket which determines which bond is desaturated. (PDB: 4ZYO​)
Stearoyl–CoA (black) held in a kinked conformation by SCD1's binding pocket which determines which bond is desaturated. (PDB: 4ZYO​)
Stearoyl-CoA 9-desaturase: SCD with the major ligand, stearyl-CoA (magenta), docked to the active site. (Monomeric crystal structure, PDB: 4YMK​)
SCD with the major ligand, stearyl-CoA (magenta), docked to the active site. (Monomeric crystal structure, PDB: 4YMK​)

Worked examples

Example 1 — a first encounter with Stearoyl-CoA 9-desaturase

Start with the simplest possible case. Write down what Stearoyl-CoA 9-desaturase claims or describes in one sentence, then invent the smallest concrete situation in which that sentence is true. In engineering, the smallest case is usually a single object, a single equation or a single measurement. Check that every symbol or term in your sentence has a meaning in that case.

Example 2 — changing one variable

Take the situation from Example 1 and change exactly one quantity: double it, halve it, or set it to zero. Predict what should happen to Stearoyl-CoA 9-desaturase before you calculate. Comparing your prediction with the result is the fastest way to find out whether you understand the idea or only the words.

Example 3 — an exam-style question

Typical questions about Stearoyl-CoA 9-desaturase ask you to (a) state it precisely, (b) apply it to given data, and (c) explain a limitation. Practise writing all three answers in under five minutes; the third part is what separates a full-mark answer from an average one.

Applications of Stearoyl-CoA 9-desaturase

In research
Stearoyl-CoA 9-desaturase appears in engineering research whenever the underlying quantities have to be modelled precisely. Papers usually cite it as a starting assumption and then explore where it breaks down.
In technology and industry
Engineering practice reuses Stearoyl-CoA 9-desaturase in design rules, simulations and safety margins. Knowing the idea lets you read a specification sheet and understand why the numbers look the way they do.
In the classroom
Stearoyl-CoA 9-desaturase is common in secondary-school and first-year university syllabi. It links to neighbouring topics EC 1.14.19, Enzymes of unknown structure, Iron enzymes, so understanding it makes those chapters shorter.
In everyday life
Look for Stearoyl-CoA 9-desaturase outside the textbook — in sport, cooking, traffic, electronics or the sky above you. An example you found yourself is remembered far longer than one you were given.
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How to study Stearoyl-CoA 9-desaturase in 20 minutes

  1. Read the reference excerpt below once, without taking notes.
  2. Close the page and write down what Stearoyl-CoA 9-desaturase means in your own words.
  3. Compare your version with the excerpt and mark what you missed.
  4. Work through the three examples above with pen and paper.
  5. Explain Stearoyl-CoA 9-desaturase out loud to somebody else — or to Teacher Smith in the lgStudy chat.

Frequently asked questions

What is Stearoyl-CoA 9-desaturase in simple terms?

Stearoyl-CoA desaturase (Δ-9-desaturase or SCD-1) is an endoplasmic reticulum enzyme that catalyzes the rate-limiting step in the formation of monounsaturated fatty acids (MUFAs), specifically oleate and palmitoleate from stearoyl-CoA and palmitoyl-CoA. Oleate and palmitoleate are major components…

Why does Stearoyl-CoA 9-desaturase matter?

Because it connects several engineering ideas at once: it gives you a definition you can apply, a quantity you can calculate, and a way to check whether a result is plausible.

How should I study Stearoyl-CoA 9-desaturase?

Read the excerpt, restate it from memory, then work through the examples and applications listed on this page. The five-step study plan above takes about twenty minutes.

What does this page cover?

It gives you a compact reference excerpt plus original lgStudy explanations, examples, applications and study material on Stearoyl-CoA 9-desaturase.

Tags

  • EC 1.14.19
  • Enzymes of unknown structure
  • Iron enzymes

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